Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRAV26-1A0A087WT03 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 AL136379.1-201ENST00000623471 2642 ntBASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV26-1A0A087WT03 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 LINC01023-201ENST00000606054 436 ntBASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 KRT18P22-201ENST00000402024 1347 ntBASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV26-1A0A087WT03 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 ECEL1P3-201ENST00000427961 737 ntBASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 AC145285.6-201ENST00000604632 637 ntBASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV26-1A0A087WT03 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV26-1A0A087WT03 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms