Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AC024243.1-201ENST00000609234 778 ntBASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 AC036111.1-201ENST00000533973 1582 ntBASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PCDHGA6Q9Y5G7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDHGA6Q9Y5G7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 TPM4P1-201ENST00000436100 807 ntBASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDHGA6Q9Y5G7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 SEC1P-202ENST00000473944 940 ntBASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 AL691432.3-201ENST00000621860 400 ntBASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 AC020763.4-201ENST00000623414 4170 ntBASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDHGA6Q9Y5G7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDHGA6Q9Y5G7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms