Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 UPK3BP1-201ENST00000428678 509 ntBASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 AC009947.2-201ENST00000444014 672 ntBASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB6Q9Y5F9 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 AC006333.2-201ENST00000607957 2099 ntBASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 AC139713.2-201ENST00000641328 2723 ntBASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB6Q9Y5F9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 AC012313.1-201ENST00000593393 3059 ntBASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDHGB6Q9Y5F9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDHGB6Q9Y5F9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms