Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 AC124864.1-201ENST00000623408 392 ntBASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBQLN1Q9UMX0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 LINC00265-3P-201ENST00000447588 903 ntBASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 TOB2P1-201ENST00000469761 992 ntBASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 CLEC4GP1-201ENST00000596555 870 ntBASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBQLN1Q9UMX0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 WIZP1-201ENST00000531444 2299 ntBASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
UBQLN1Q9UMX0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 TSPY12P-201ENST00000421279 868 ntBASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 MIR3652-201ENST00000579335 131 ntBASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 ESPNP-201ENST00000270691 2015 ntBASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBQLN1Q9UMX0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.57■□□□□ 0.72
UBQLN1Q9UMX0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms