Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.57■□□□□ 0.4
VPS29Q9UBQ0 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 AC008764.6-201ENST00000595909 2069 ntBASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 AL512604.3-201ENST00000569583 964 ntBASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS29Q9UBQ0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 FLJ13224-201ENST00000313737 1514 ntBASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 AC005332.8-201ENST00000622750 2735 ntBASIC17.55■□□□□ 0.4
VPS29Q9UBQ0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms