Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 DCXR-219ENST00000584318 284 ntTSL 523.34■■□□□ 1.334e-6■■□□□ 12.6
DROSHAQ9NRR4 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)18.58■□□□□ 0.574e-6■■□□□ 12.6
DROSHAQ9NRR4 AC087380.1-201ENST00000420465 1001 ntTSL 311.28□□□□□ -0.64e-6■■□□□ 12.6
DROSHAQ9NRR4 AC087380.1-203ENST00000420726 752 ntTSL 59.19□□□□□ -0.944e-6■■□□□ 12.6
DROSHAQ9NRR4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.92□□□□□ -1.34e-6■■□□□ 12.6
DROSHAQ9NRR4 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.434e-7■■□□□ 12.6
DROSHAQ9NRR4 SLC13A5-207ENST00000572727 618 ntTSL 222.43■■□□□ 1.182e-6■■□□□ 12.6
DROSHAQ9NRR4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.692e-6■■□□□ 12.5
DROSHAQ9NRR4 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC20.7■□□□□ 0.93e-7■■□□□ 12.5
DROSHAQ9NRR4 AC138409.2-202ENST00000507274 458 ntBASIC6.26□□□□□ -1.413e-7■■□□□ 12.5
DROSHAQ9NRR4 NISCH-209ENST00000485765 563 ntTSL 429.26■■■□□ 2.286e-7■■□□□ 12.5
DROSHAQ9NRR4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.746e-7■■□□□ 12.5
DROSHAQ9NRR4 NISCH-213ENST00000489895 5350 ntTSL 221.01■□□□□ 0.956e-7■■□□□ 12.5
DROSHAQ9NRR4 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.396e-7■■□□□ 12.5
DROSHAQ9NRR4 UBAC1-204ENST00000478485 773 ntTSL 236.93■■■■□ 3.55e-7■■□□□ 12.5
DROSHAQ9NRR4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC37.79■■■■□ 3.644e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-211ENST00000600753 483 ntTSL 433.47■■■□□ 2.954e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC29.76■■■□□ 2.354e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.354e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-207ENST00000596995 2106 ntTSL 228.17■■■□□ 2.14e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-204ENST00000414294 2211 ntTSL 228.17■■■□□ 2.14e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-208ENST00000597808 570 ntTSL 227.37■■□□□ 1.974e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24.44■■□□□ 1.54e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-205ENST00000594144 723 ntTSL 324.41■■□□□ 1.54e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-202ENST00000546778 1146 ntTSL 224.08■■□□□ 1.455e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.435e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-206ENST00000594526 709 ntTSL 320.7■□□□□ 0.94e-6■■□□□ 12.5
DROSHAQ9NRR4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.224e-6■■□□□ 12.5
DROSHAQ9NRR4 SAE1-210ENST00000600706 744 ntTSL 514.94□□□□□ -0.024e-6■■□□□ 12.5
DROSHAQ9NRR4 PTPN23-206ENST00000602307 5119 ntTSL 214.71□□□□□ -0.054e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-203ENST00000547604 276 ntTSL 313.29□□□□□ -0.285e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-213ENST00000551407 544 ntTSL 413.29□□□□□ -0.285e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-212ENST00000550876 564 ntTSL 410.04□□□□□ -0.85e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-214ENST00000552453 856 ntTSL 57.76□□□□□ -1.175e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-204ENST00000547620 567 ntTSL 46.76□□□□□ -1.335e-6■■□□□ 12.5
DROSHAQ9NRR4 ZDHHC17-209ENST00000550163 730 ntTSL 34.67□□□□□ -1.665e-6■■□□□ 12.5
DROSHAQ9NRR4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC39.76■■■■□ 3.962e-11■■□□□ 12.5
DROSHAQ9NRR4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.21■■■□□ 2.432e-11■■□□□ 12.5
DROSHAQ9NRR4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC27.53■■■□□ 22e-11■■□□□ 12.5
DROSHAQ9NRR4 CALM3-213ENST00000602169 590 ntTSL 220.42■□□□□ 0.862e-11■■□□□ 12.5
DROSHAQ9NRR4 CALM3-206ENST00000594523 540 ntTSL 4 BASIC19.19■□□□□ 0.662e-11■■□□□ 12.5
DROSHAQ9NRR4 CALM3-203ENST00000477244 696 ntTSL 318.15■□□□□ 0.52e-11■■□□□ 12.5
DROSHAQ9NRR4 CALM3-210ENST00000597868 927 ntTSL 316.56■□□□□ 0.242e-11■■□□□ 12.5
DROSHAQ9NRR4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.233e-7■■□□□ 12.5
DROSHAQ9NRR4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.213e-7■■□□□ 12.5
DROSHAQ9NRR4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.123e-7■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-208ENST00000564966 1122 ntTSL 239.3■■■■□ 3.881e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-213ENST00000568810 1080 ntTSL 238.14■■■■□ 3.71e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-206ENST00000563597 815 ntTSL 338.14■■■■□ 3.71e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-209ENST00000566749 1490 ntTSL 537.69■■■■□ 3.621e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-204ENST00000562664 941 ntTSL 337.34■■■■□ 3.571e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.511e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-203ENST00000562222 742 ntTSL 336.52■■■■□ 3.441e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC36.07■■■■□ 3.371e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-212ENST00000567828 742 ntTSL 335.23■■■■□ 3.231e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-205ENST00000563200 1447 ntTSL 533.5■■■□□ 2.951e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-211ENST00000567642 658 ntTSL 232.46■■■□□ 2.791e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-207ENST00000563732 846 ntTSL 232.29■■■□□ 2.761e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.121e-10■■□□□ 12.5
DROSHAQ9NRR4 PPP4C-210ENST00000567040 879 ntTSL 227.37■■□□□ 1.971e-10■■□□□ 12.5
DROSHAQ9NRR4 EIF4A1-206ENST00000577929 696 ntTSL 229.62■■■□□ 2.336e-17■■□□□ 12.5
DROSHAQ9NRR4 EIF4A1-219ENST00000581770 447 ntTSL 222.09■■□□□ 1.135e-11■■□□□ 12.5
DROSHAQ9NRR4 EIF4A1-205ENST00000577738 531 ntTSL 219.89■□□□□ 0.775e-11■■□□□ 12.5
DROSHAQ9NRR4 EIF4A1-217ENST00000581384 642 ntTSL 515.37■□□□□ 0.056e-17■■□□□ 12.5
DROSHAQ9NRR4 TANGO2-218ENST00000462579 649 ntTSL 425.6■■□□□ 1.694e-7■■□□□ 12.5
DROSHAQ9NRR4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC33.6■■■□□ 2.972e-6■■□□□ 12.5
DROSHAQ9NRR4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.432e-6■■□□□ 12.5
DROSHAQ9NRR4 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC27.73■■■□□ 2.032e-6■■□□□ 12.5
DROSHAQ9NRR4 IMPDH1-207ENST00000469328 2295 ntTSL 520.73■□□□□ 0.912e-6■■□□□ 12.5
DROSHAQ9NRR4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC36.17■■■■□ 3.381e-6■■□□□ 12.5
DROSHAQ9NRR4 HMG20B-201ENST00000262949 886 ntTSL 535.89■■■■□ 3.341e-6■■□□□ 12.5
DROSHAQ9NRR4 HMG20B-203ENST00000416526 711 ntTSL 333.64■■■□□ 2.981e-6■■□□□ 12.5
DROSHAQ9NRR4 HMG20B-213ENST00000488973 2434 ntTSL 1 (best)27.69■■■□□ 2.021e-6■■□□□ 12.5
DROSHAQ9NRR4 SOD1-203ENST00000470944 1746 ntTSL 244.04■■■■■ 4.642e-18■■□□□ 12.5
DROSHAQ9NRR4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.432e-18■■□□□ 12.5
DROSHAQ9NRR4 SOD1-204ENST00000476106 586 ntTSL 520.9■□□□□ 0.942e-18■■□□□ 12.5
DROSHAQ9NRR4 SOD1-202ENST00000389995 865 ntTSL 3 BASIC19.22■□□□□ 0.672e-18■■□□□ 12.5
DROSHAQ9NRR4 SAR1A-203ENST00000373239 468 ntTSL 321.67■■□□□ 1.069e-8■■□□□ 12.5
DROSHAQ9NRR4 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.879e-8■■□□□ 12.5
DROSHAQ9NRR4 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.59e-8■■□□□ 12.5
DROSHAQ9NRR4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC36.52■■■■□ 3.441e-9■■□□□ 12.5
DROSHAQ9NRR4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.371e-9■■□□□ 12.5
DROSHAQ9NRR4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC21.35■■□□□ 1.011e-9■■□□□ 12.5
DROSHAQ9NRR4 RHOBTB3-207ENST00000506959 547 ntTSL 520.11■□□□□ 0.811e-9■■□□□ 12.5
DROSHAQ9NRR4 RHOBTB3-209ENST00000510226 560 ntTSL 420.11■□□□□ 0.811e-9■■□□□ 12.5
DROSHAQ9NRR4 RHOBTB3-205ENST00000504949 1511 ntTSL 218.22■□□□□ 0.511e-9■■□□□ 12.5
DROSHAQ9NRR4 RHOBTB3-216ENST00000515852 575 ntTSL 414.54□□□□□ -0.081e-9■■□□□ 12.5
DROSHAQ9NRR4 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.815e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC25.17■■□□□ 1.625e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.275e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-209ENST00000482691 690 ntTSL 322.19■■□□□ 1.145e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-205ENST00000435417 966 ntTSL 521.84■■□□□ 1.095e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-210ENST00000489674 437 ntTSL 520.85■□□□□ 0.935e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.745e-7■■□□□ 12.4
DROSHAQ9NRR4 CRELD1-208ENST00000467713 540 ntTSL 219.18■□□□□ 0.665e-7■■□□□ 12.4
DROSHAQ9NRR4 NPAS2-202ENST00000427413 625 ntTSL 311.28□□□□□ -0.62e-8■■□□□ 12.4
DROSHAQ9NRR4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC35.13■■■■□ 3.211e-6■■□□□ 12.4
DROSHAQ9NRR4 ERRFI1-205ENST00000487559 787 ntTSL 235.13■■■■□ 3.211e-6■■□□□ 12.4
DROSHAQ9NRR4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC34.93■■■■□ 3.181e-6■■□□□ 12.4
DROSHAQ9NRR4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.21e-6■■□□□ 12.4
Retrieved 100 of 16,331 protein–RNA pairs in 87.5 ms