Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 AC005052.1-201ENST00000625181 2492 ntBASIC21.61■■□□□ 1.05
RTN4Q9NQC3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 HLA-G-202ENST00000376815 851 ntBASIC21.61■■□□□ 1.05
RTN4Q9NQC3 HLA-G-203ENST00000376818 1127 ntBASIC21.61■■□□□ 1.05
RTN4Q9NQC3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 AL355472.2-201ENST00000422958 438 ntBASIC21.61■■□□□ 1.05
RTN4Q9NQC3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 AC087623.3-201ENST00000607047 1098 ntBASIC21.61■■□□□ 1.05
RTN4Q9NQC3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 AC011767.1-201ENST00000617410 1153 ntBASIC21.6■■□□□ 1.05
RTN4Q9NQC3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RTN4Q9NQC3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 AC023632.3-201ENST00000521633 145 ntBASIC21.59■■□□□ 1.05
RTN4Q9NQC3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.59■■□□□ 1.05
RTN4Q9NQC3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
RTN4Q9NQC3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 KRT18P5-201ENST00000436075 1291 ntBASIC21.58■■□□□ 1.05
RTN4Q9NQC3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC21.58■■□□□ 1.05
RTN4Q9NQC3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RTN4Q9NQC3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms