Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.31■■□□□ 1
SH2D4AQ9H788 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.31■■□□□ 1
SH2D4AQ9H788 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.31■■□□□ 1
SH2D4AQ9H788 NSUN5P1-202ENST00000421140 1535 ntBASIC21.31■■□□□ 1
SH2D4AQ9H788 NSUN5P2-203ENST00000457352 1529 ntBASIC21.31■■□□□ 1
SH2D4AQ9H788 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.31■■□□□ 1
SH2D4AQ9H788 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.31■■□□□ 1
SH2D4AQ9H788 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.31■■□□□ 1
SH2D4AQ9H788 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
SH2D4AQ9H788 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC21.31■■□□□ 1
SH2D4AQ9H788 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.31■■□□□ 1
SH2D4AQ9H788 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SH2D4AQ9H788 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.31■■□□□ 1
SH2D4AQ9H788 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SH2D4AQ9H788 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 SDHAP2-201ENST00000455183 2001 ntBASIC21.3■■□□□ 1
SH2D4AQ9H788 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC21.3■■□□□ 1
SH2D4AQ9H788 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.3■■□□□ 1
SH2D4AQ9H788 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.3■■□□□ 1
SH2D4AQ9H788 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.3■■□□□ 1
SH2D4AQ9H788 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SH2D4AQ9H788 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.3■■□□□ 1
SH2D4AQ9H788 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
SH2D4AQ9H788 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SH2D4AQ9H788 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.29■■□□□ 1
SH2D4AQ9H788 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.29■■□□□ 1
SH2D4AQ9H788 MINOS1P3-201ENST00000457048 203 ntBASIC21.29■■□□□ 1
SH2D4AQ9H788 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.29■■□□□ 1
SH2D4AQ9H788 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.29■■□□□ 1
SH2D4AQ9H788 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 AL353801.3-201ENST00000609898 542 ntBASIC21.29■■□□□ 1
SH2D4AQ9H788 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SH2D4AQ9H788 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.29■■□□□ 1
SH2D4AQ9H788 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
SH2D4AQ9H788 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SH2D4AQ9H788 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.28■■□□□ 1
SH2D4AQ9H788 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.28■■□□□ 1
SH2D4AQ9H788 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
SH2D4AQ9H788 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.28■■□□□ 1
SH2D4AQ9H788 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
SH2D4AQ9H788 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SH2D4AQ9H788 TSPY12P-201ENST00000421279 868 ntBASIC21.28■■□□□ 1
SH2D4AQ9H788 EMBP1-201ENST00000458200 901 ntBASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms