Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 ELK2BP-201ENST00000415014 1224 ntBASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 KRT18P2-201ENST00000447938 1258 ntBASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP3Q9BZ76 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 HEIH-201ENST00000623091 1652 ntBASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 AC025062.2-201ENST00000605477 670 ntBASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 AL078644.1-201ENST00000609881 752 ntBASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 ELL2P1-201ENST00000413990 1906 ntBASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNTNAP3Q9BZ76 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CNTNAP3Q9BZ76 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AC010240.3-201ENST00000607688 395 ntBASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AC002310.6-201ENST00000624451 1377 ntBASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 AP005212.1-201ENST00000581547 1997 ntBASIC17.39■□□□□ 0.37
CNTNAP3Q9BZ76 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 SLC25A6P5-201ENST00000435663 894 ntBASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.38■□□□□ 0.37
CNTNAP3Q9BZ76 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms