Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.58■□□□□ 0.56
SEMA3CQ99985 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA3CQ99985 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA3CQ99985 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SEMA3CQ99985 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 AC138932.1-201ENST00000534164 6830 ntBASIC18.57■□□□□ 0.56
SEMA3CQ99985 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 AC092597.1-201ENST00000487352 616 ntBASIC18.57■□□□□ 0.56
SEMA3CQ99985 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SEMA3CQ99985 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SEMA3CQ99985 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AC135776.1-201ENST00000319817 2481 ntBASIC18.56■□□□□ 0.56
SEMA3CQ99985 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AC112907.2-201ENST00000448639 330 ntBASIC18.56■□□□□ 0.56
SEMA3CQ99985 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 LINC01238-205ENST00000567549 1107 ntBASIC18.56■□□□□ 0.56
SEMA3CQ99985 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AL136038.4-201ENST00000603606 1261 ntBASIC18.56■□□□□ 0.56
SEMA3CQ99985 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AL391807.1-203ENST00000604392 2365 ntBASIC18.56■□□□□ 0.56
SEMA3CQ99985 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AL024508.2-201ENST00000607749 1894 ntBASIC18.56■□□□□ 0.56
SEMA3CQ99985 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.56■□□□□ 0.56
SEMA3CQ99985 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SEMA3CQ99985 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 AC087388.1-201ENST00000571370 1112 ntBASIC18.55■□□□□ 0.56
SEMA3CQ99985 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.55■□□□□ 0.56
SEMA3CQ99985 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SEMA3CQ99985 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms