Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PTPN18Q99952 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 RFPL4AP1-201ENST00000530883 850 ntBASIC20.91■□□□□ 0.94
PTPN18Q99952 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN18Q99952 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PTPN18Q99952 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN18Q99952 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN18Q99952 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.91■□□□□ 0.94
PTPN18Q99952 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 AC064836.3-201ENST00000607928 673 ntBASIC20.91■□□□□ 0.94
PTPN18Q99952 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN18Q99952 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN18Q99952 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
PTPN18Q99952 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPN18Q99952 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN18Q99952 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN18Q99952 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PTPN18Q99952 CYMP-203ENST00000474680 1263 ntBASIC20.9■□□□□ 0.94
PTPN18Q99952 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.9■□□□□ 0.94
PTPN18Q99952 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN18Q99952 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN18Q99952 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN18Q99952 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN18Q99952 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
PTPN18Q99952 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN18Q99952 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN18Q99952 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN18Q99952 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PTPN18Q99952 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN18Q99952 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN18Q99952 KRT18P27-201ENST00000427733 1299 ntBASIC20.89■□□□□ 0.93
PTPN18Q99952 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN18Q99952 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PTPN18Q99952 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.89■□□□□ 0.93
PTPN18Q99952 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN18Q99952 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
PTPN18Q99952 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN18Q99952 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN18Q99952 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN18Q99952 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PTPN18Q99952 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN18Q99952 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN18Q99952 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
PTPN18Q99952 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN18Q99952 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPN18Q99952 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN18Q99952 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN18Q99952 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPN18Q99952 MCCD1P2-201ENST00000423228 335 ntBASIC20.88■□□□□ 0.93
PTPN18Q99952 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.88■□□□□ 0.93
PTPN18Q99952 YBX1P5-201ENST00000509441 847 ntBASIC20.88■□□□□ 0.93
PTPN18Q99952 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN18Q99952 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.88■□□□□ 0.93
PTPN18Q99952 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.88■□□□□ 0.93
PTPN18Q99952 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN18Q99952 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.88■□□□□ 0.93
PTPN18Q99952 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
PTPN18Q99952 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN18Q99952 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN18Q99952 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PTPN18Q99952 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN18Q99952 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.87■□□□□ 0.93
PTPN18Q99952 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PTPN18Q99952 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
PTPN18Q99952 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN18Q99952 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN18Q99952 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN18Q99952 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.87■□□□□ 0.93
PTPN18Q99952 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PTPN18Q99952 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPN18Q99952 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PTPN18Q99952 AC073621.1-201ENST00000392730 636 ntBASIC20.87■□□□□ 0.93
PTPN18Q99952 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN18Q99952 BX005266.1-201ENST00000473402 457 ntBASIC20.87■□□□□ 0.93
PTPN18Q99952 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms