Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.99■□□□□ 0.63
CDCA3Q99618 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.99■□□□□ 0.63
CDCA3Q99618 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.99■□□□□ 0.63
CDCA3Q99618 RPS8P6-201ENST00000426177 609 ntBASIC18.99■□□□□ 0.63
CDCA3Q99618 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.99■□□□□ 0.63
CDCA3Q99618 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.99■□□□□ 0.63
CDCA3Q99618 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.99■□□□□ 0.63
CDCA3Q99618 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.99■□□□□ 0.63
CDCA3Q99618 AP000867.4-201ENST00000641616 219 ntBASIC18.99■□□□□ 0.63
CDCA3Q99618 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CDCA3Q99618 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.99■□□□□ 0.63
CDCA3Q99618 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDCA3Q99618 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.99■□□□□ 0.63
CDCA3Q99618 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDCA3Q99618 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.98■□□□□ 0.63
CDCA3Q99618 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDCA3Q99618 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDCA3Q99618 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.98■□□□□ 0.63
CDCA3Q99618 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.98■□□□□ 0.63
CDCA3Q99618 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CDCA3Q99618 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.98■□□□□ 0.63
CDCA3Q99618 MTDHP5-201ENST00000598980 586 ntBASIC18.98■□□□□ 0.63
CDCA3Q99618 PGM5P2-202ENST00000637225 1043 ntBASIC18.98■□□□□ 0.63
CDCA3Q99618 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 AL157384.1-201ENST00000445995 2473 ntBASIC18.98■□□□□ 0.63
CDCA3Q99618 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDCA3Q99618 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.98■□□□□ 0.63
CDCA3Q99618 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CDCA3Q99618 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CDCA3Q99618 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.97■□□□□ 0.63
CDCA3Q99618 AC112698.1-201ENST00000510299 916 ntBASIC18.97■□□□□ 0.63
CDCA3Q99618 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.97■□□□□ 0.63
CDCA3Q99618 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CDCA3Q99618 AC027796.2-201ENST00000575326 344 ntBASIC18.97■□□□□ 0.63
CDCA3Q99618 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.97■□□□□ 0.63
CDCA3Q99618 AC134684.3-201ENST00000641758 218 ntBASIC18.97■□□□□ 0.63
CDCA3Q99618 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
CDCA3Q99618 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.97■□□□□ 0.63
CDCA3Q99618 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDCA3Q99618 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.97■□□□□ 0.63
CDCA3Q99618 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA3Q99618 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA3Q99618 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CDCA3Q99618 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA3Q99618 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.96■□□□□ 0.63
CDCA3Q99618 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.96■□□□□ 0.63
CDCA3Q99618 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.96■□□□□ 0.63
CDCA3Q99618 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA3Q99618 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA3Q99618 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.96■□□□□ 0.63
CDCA3Q99618 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 AP002414.3-201ENST00000589352 1468 ntBASIC18.96■□□□□ 0.63
CDCA3Q99618 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDCA3Q99618 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDCA3Q99618 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms