Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 AL353719.1-201ENST00000566847 864 ntBASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 MIR4497-201ENST00000583208 89 ntBASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HIST1H2AAQ96QV6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
HIST1H2AAQ96QV6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
HIST1H2AAQ96QV6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 LTB4R2-202ENST00000528054 3092 ntBASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 AC128688.1-201ENST00000487626 519 ntBASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HIST1H2AAQ96QV6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 KRT18P41-201ENST00000518924 1277 ntBASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H2AAQ96QV6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 AL390955.1-201ENST00000428694 934 ntBASIC15.87■□□□□ 0.13
HIST1H2AAQ96QV6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms