Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 AL390955.1-201ENST00000428694 934 ntBASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 WBP1LP6-201ENST00000438434 424 ntBASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 SLC25A1P4-201ENST00000567977 778 ntBASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 WIZP1-201ENST00000531444 2299 ntBASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MS4A3Q96HJ5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.64■□□□□ 0.26
MS4A3Q96HJ5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.64■□□□□ 0.26
MS4A3Q96HJ5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
MS4A3Q96HJ5 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 KRT8P11-201ENST00000409686 1436 ntBASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 MIR1238-201ENST00000408483 83 ntBASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AC097488.1-201ENST00000507834 756 ntBASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AP000692.2-201ENST00000608391 879 ntBASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MS4A3Q96HJ5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 PTMA-204ENST00000409683 933 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AL353626.3-201ENST00000413399 657 ntBASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 TSPY23P-201ENST00000440136 739 ntBASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AP003168.1-201ENST00000530091 307 ntBASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 BX088651.1-201ENST00000540551 451 ntBASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AC010487.2-201ENST00000594546 486 ntTSL 2 BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 DGCR10-201ENST00000609839 495 ntBASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AC063944.3-201ENST00000609969 533 ntBASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 AL732372.1-203ENST00000635159 994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MS4A3Q96HJ5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms