RNA–Protein interactions for RNA: ENST00000609969.1

AC063944.3-201, humanhuman

BASIC

Gene AC063944.3, Length 533 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC063944.3-201ENST00000609969 AEBP2Q6ZN18 517 aaPredicted RBP33.5■■■□□ 2.95
AC063944.3-201ENST00000609969 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
AC063944.3-201ENST00000609969 SENP3Q9H4L4 574 aaPredicted RBP28.49■■■□□ 2.15
AC063944.3-201ENST00000609969 PHF23Q9BUL5 403 aaPredicted RBP28.34■■■□□ 2.13
AC063944.3-201ENST00000609969 FOXD1Q16676 465 aa26.5■■□□□ 1.83
AC063944.3-201ENST00000609969 PLPPR3Q6T4P5 718 aa25.99■■□□□ 1.75
AC063944.3-201ENST00000609969 PPP6R1Q9UPN7 881 aa25.14■■□□□ 1.62
AC063944.3-201ENST00000609969 ADRA2BP18089 450 aa25.06■■□□□ 1.6
AC063944.3-201ENST00000609969 PIAS4Q8N2W9 510 aaPredicted RBP24.85■■□□□ 1.57
AC063944.3-201ENST00000609969 MSH5O43196 834 aa24.63■■□□□ 1.53
AC063944.3-201ENST00000609969 POTEDQ86YR6 584 aa23.23■■□□□ 1.31
AC063944.3-201ENST00000609969 SCAF1Q9H7N4 1312 aaKnown RBP22.95■■□□□ 1.26
AC063944.3-201ENST00000609969 MAPK8IP2Q13387 824 aaPredicted RBP22.88■■□□□ 1.25
AC063944.3-201ENST00000609969 PPP4R3CPQ6ZMV5 832 aa22.83■■□□□ 1.25
AC063944.3-201ENST00000609969 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
AC063944.3-201ENST00000609969 CNKSR2Q8WXI2 1034 aa22.31■■□□□ 1.16
AC063944.3-201ENST00000609969 NCBP3Q53F19 620 aaKnown RBP22.09■■□□□ 1.13
AC063944.3-201ENST00000609969 HOXD11P31277 338 aaPredicted RBP22.06■■□□□ 1.12
AC063944.3-201ENST00000609969 RNF216Q9NWF9 866 aaPredicted RBP22.01■■□□□ 1.11
AC063944.3-201ENST00000609969 NPM3O75607 178 aaKnown RBP21.78■■□□□ 1.08
AC063944.3-201ENST00000609969 KCNA4P22459 653 aa21.76■■□□□ 1.07
AC063944.3-201ENST00000609969 DCAF8L1A6NGE4 600 aa21.63■■□□□ 1.05
AC063944.3-201ENST00000609969 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
AC063944.3-201ENST00000609969 RNF39Q9H2S5 420 aa21.07■□□□□ 0.96
AC063944.3-201ENST00000609969 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.94■□□□□ 0.94
AC063944.3-201ENST00000609969 CACNB1Q02641 598 aaPredicted RBP20.8■□□□□ 0.92
AC063944.3-201ENST00000609969 C1QBPQ07021 282 aaKnown RBP20.79■□□□□ 0.92
AC063944.3-201ENST00000609969 SLC4A2P04920 1241 aa20.7■□□□□ 0.9
AC063944.3-201ENST00000609969 SLC4A1APQ9BWU0 796 aaKnown RBP20.62■□□□□ 0.89
AC063944.3-201ENST00000609969 U3KPZ7 1027 aaPredicted RBP20.6■□□□□ 0.89
AC063944.3-201ENST00000609969 FOXD4L1Q9NU39 408 aa20.18■□□□□ 0.82
AC063944.3-201ENST00000609969 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.17■□□□□ 0.82
AC063944.3-201ENST00000609969 HNRNPUL2Q1KMD3 747 aaKnown RBP20.17■□□□□ 0.82
AC063944.3-201ENST00000609969 MYCNP04198 464 aaPredicted RBP20.13■□□□□ 0.81
AC063944.3-201ENST00000609969 SPINK5Q9NQ38 1064 aaPredicted RBP20.13■□□□□ 0.81
AC063944.3-201ENST00000609969 SAMD1Q6SPF0 538 aaPredicted RBP20.07■□□□□ 0.8
AC063944.3-201ENST00000609969 APLP2Q06481 763 aa20.06■□□□□ 0.8
AC063944.3-201ENST00000609969 CAPN15O75808 1086 aa20.05■□□□□ 0.8
AC063944.3-201ENST00000609969 ZBTB22O15209 634 aa20.03■□□□□ 0.8
AC063944.3-201ENST00000609969 DSG3P32926 999 aa19.88■□□□□ 0.77
AC063944.3-201ENST00000609969 ZNF219Q9P2Y4 722 aaPredicted RBP19.86■□□□□ 0.77
AC063944.3-201ENST00000609969 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
AC063944.3-201ENST00000609969 ABCB7O75027 752 aa19.62■□□□□ 0.73
AC063944.3-201ENST00000609969 ATF5Q9Y2D1 282 aaPredicted RBP19.62■□□□□ 0.73
AC063944.3-201ENST00000609969 ATXN8OSP0DMR3 200 aa19.54■□□□□ 0.72
AC063944.3-201ENST00000609969 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
AC063944.3-201ENST00000609969 POLA2Q14181 598 aa19.45■□□□□ 0.7
AC063944.3-201ENST00000609969 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
AC063944.3-201ENST00000609969 ZBTB12Q9Y330 459 aaPredicted RBP19.1■□□□□ 0.65
AC063944.3-201ENST00000609969 RBM42Q9BTD8 480 aaKnown RBP18.94■□□□□ 0.62
AC063944.3-201ENST00000609969 FBLN2P98095 1184 aa18.8■□□□□ 0.6
AC063944.3-201ENST00000609969 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
AC063944.3-201ENST00000609969 MKRN4PQ13434 485 aaPredicted RBP18.76■□□□□ 0.59
AC063944.3-201ENST00000609969 AKT1S1Q96B36 256 aa18.62■□□□□ 0.57
AC063944.3-201ENST00000609969 SPDYE2BA6NHP3 402 aa18.55■□□□□ 0.56
AC063944.3-201ENST00000609969 SPDYE6P0CI01 402 aa18.55■□□□□ 0.56
AC063944.3-201ENST00000609969 SPDYE2Q495Y8 402 aa18.55■□□□□ 0.56
AC063944.3-201ENST00000609969 REM2Q8IYK8 340 aaPredicted RBP18.43■□□□□ 0.54
AC063944.3-201ENST00000609969 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
AC063944.3-201ENST00000609969 SSUH2Q9Y2M2 353 aa18.38■□□□□ 0.53
AC063944.3-201ENST00000609969 CHRDL2Q6WN34 429 aa18.33■□□□□ 0.52
AC063944.3-201ENST00000609969 POTEHQ6S545 545 aa18.29■□□□□ 0.52
AC063944.3-201ENST00000609969 PITPNM1O00562 1244 aa18.22■□□□□ 0.51
AC063944.3-201ENST00000609969 PABPN1Q86U42 306 aaKnown RBP eCLIP18.13■□□□□ 0.49
AC063944.3-201ENST00000609969 SPDYE1Q8NFV5 336 aaPredicted RBP18.1■□□□□ 0.49
AC063944.3-201ENST00000609969 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
AC063944.3-201ENST00000609969 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
AC063944.3-201ENST00000609969 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
AC063944.3-201ENST00000609969 PIP4P2Q8N4L2 257 aa18■□□□□ 0.47
AC063944.3-201ENST00000609969 PRR29P0C7W0 189 aa17.81■□□□□ 0.44
AC063944.3-201ENST00000609969 PROM2Q8N271 834 aa17.79■□□□□ 0.44
AC063944.3-201ENST00000609969 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
AC063944.3-201ENST00000609969 PRKAR2AP13861 404 aaKnown RBP17.74■□□□□ 0.43
AC063944.3-201ENST00000609969 FKBP8Q14318 412 aa17.65■□□□□ 0.42
AC063944.3-201ENST00000609969 CHADLQ6NUI6 762 aa17.63■□□□□ 0.41
AC063944.3-201ENST00000609969 HAX1O00165 279 aa17.52■□□□□ 0.4
AC063944.3-201ENST00000609969 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
AC063944.3-201ENST00000609969 FARP1Q9Y4F1 1045 aaPredicted RBP17.45■□□□□ 0.38
AC063944.3-201ENST00000609969 C19orf67A6NJJ6 358 aa17.4■□□□□ 0.38
AC063944.3-201ENST00000609969 EVX2Q03828 476 aa17.38■□□□□ 0.37
AC063944.3-201ENST00000609969 SP7Q8TDD2 431 aaPredicted RBP17.37■□□□□ 0.37
AC063944.3-201ENST00000609969 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
AC063944.3-201ENST00000609969 CD44P16070 742 aaKnown RBP17.21■□□□□ 0.35
AC063944.3-201ENST00000609969 NPM1P06748 294 aaKnown RBP eCLIP17.18■□□□□ 0.34
AC063944.3-201ENST00000609969 MIER1Q8N108 512 aa17.18■□□□□ 0.34
AC063944.3-201ENST00000609969 FBXO3Q9UK99 471 aa17.18■□□□□ 0.34
AC063944.3-201ENST00000609969 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
AC063944.3-201ENST00000609969 PLCD3Q8N3E9 789 aa17.1■□□□□ 0.33
AC063944.3-201ENST00000609969 ZRANB1Q9UGI0 708 aa17.03■□□□□ 0.32
AC063944.3-201ENST00000609969 GABBR2O75899 941 aa17.01■□□□□ 0.31
AC063944.3-201ENST00000609969 ZNF579Q8NAF0 562 aaKnown RBP17■□□□□ 0.31
AC063944.3-201ENST00000609969 PAK3O75914 559 aaPredicted RBP16.99■□□□□ 0.31
AC063944.3-201ENST00000609969 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
AC063944.3-201ENST00000609969 CLCN6P51797 869 aa16.96■□□□□ 0.31
AC063944.3-201ENST00000609969 VASPP50552 380 aaPredicted RBP16.95■□□□□ 0.3
AC063944.3-201ENST00000609969 RASEFQ8IZ41 740 aa16.86■□□□□ 0.29
AC063944.3-201ENST00000609969 NUBP1P53384 320 aa16.85■□□□□ 0.29
AC063944.3-201ENST00000609969 TSPYL2Q9H2G4 693 aaPredicted RBP16.85■□□□□ 0.29
AC063944.3-201ENST00000609969 PHF12Q96QT6 1004 aa16.83■□□□□ 0.28
AC063944.3-201ENST00000609969 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms