Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL023284.2-201ENST00000405850 579 ntBASIC21.75■■□□□ 1.07
DDX11Q96FC9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX11Q96FC9 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
DDX11Q96FC9 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 AC099343.3-201ENST00000605834 2503 ntBASIC21.74■■□□□ 1.07
DDX11Q96FC9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 VENTXP5-201ENST00000523979 775 ntBASIC21.74■■□□□ 1.07
DDX11Q96FC9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX11Q96FC9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
DDX11Q96FC9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 STARP1-201ENST00000397973 869 ntBASIC21.73■■□□□ 1.07
DDX11Q96FC9 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MIR4674-201ENST00000582457 87 ntBASIC21.73■■□□□ 1.07
DDX11Q96FC9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 AC116407.4-201ENST00000623319 1061 ntBASIC21.73■■□□□ 1.07
DDX11Q96FC9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
DDX11Q96FC9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 AL109659.2-201ENST00000606809 1674 ntBASIC21.72■■□□□ 1.07
DDX11Q96FC9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 AL136038.3-201ENST00000561909 1096 ntBASIC21.72■■□□□ 1.07
DDX11Q96FC9 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.72■■□□□ 1.07
DDX11Q96FC9 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX11Q96FC9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms