Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 AC140113.3-201ENST00000605663 199 ntBASIC19.63■□□□□ 0.73
LMO3Q8TAP4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LMO3Q8TAP4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.62■□□□□ 0.73
LMO3Q8TAP4 SLC25A6P5-201ENST00000435663 894 ntBASIC19.62■□□□□ 0.73
LMO3Q8TAP4 KRT18P57-201ENST00000443599 1254 ntBASIC19.62■□□□□ 0.73
LMO3Q8TAP4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.62■□□□□ 0.73
LMO3Q8TAP4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 STARP1-201ENST00000397973 869 ntBASIC19.61■□□□□ 0.73
LMO3Q8TAP4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LMO3Q8TAP4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 AL391807.1-203ENST00000604392 2365 ntBASIC19.6■□□□□ 0.73
LMO3Q8TAP4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.6■□□□□ 0.73
LMO3Q8TAP4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 AC104076.2-201ENST00000448912 469 ntBASIC19.6■□□□□ 0.73
LMO3Q8TAP4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
LMO3Q8TAP4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 LINC00167-201ENST00000530583 1419 ntBASIC19.59■□□□□ 0.73
LMO3Q8TAP4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.59■□□□□ 0.73
LMO3Q8TAP4 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LMO3Q8TAP4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms