Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 LIN28AP1-201ENST00000429574 405 ntBASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 ATP5G1P1-201ENST00000448724 379 ntBASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 AL024508.2-201ENST00000607749 1894 ntBASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDH19Q8TAB3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 ARMC10P1-201ENST00000313754 855 ntBASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 AC009065.1-201ENST00000564055 1225 ntBASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDH19Q8TAB3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 MIR3917-201ENST00000580971 93 ntBASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 AC138028.4-201ENST00000564984 1845 ntBASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
PCDH19Q8TAB3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH19Q8TAB3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
PCDH19Q8TAB3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH19Q8TAB3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
PCDH19Q8TAB3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 AC068880.1-201ENST00000507289 2297 ntBASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDH19Q8TAB3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms