Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MTCL1P1-201ENST00000446207 792 ntBASIC14.22□□□□□ -0.13
LINC01006Q8NI28 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MTDHP3-201ENST00000594186 672 ntBASIC14.22□□□□□ -0.13
LINC01006Q8NI28 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
LINC01006Q8NI28 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 FGFR3P6-201ENST00000457012 610 ntBASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SCARNA2-201ENST00000458748 420 ntBASIC14.21□□□□□ -0.13
LINC01006Q8NI28 KRT18P58-201ENST00000527480 1120 ntBASIC14.21□□□□□ -0.13
LINC01006Q8NI28 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC01006Q8NI28 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.21□□□□□ -0.14
LINC01006Q8NI28 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
LINC01006Q8NI28 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 INTS4P1-201ENST00000438455 1935 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 LINC00602-201ENST00000629776 2065 ntBASIC14.2□□□□□ -0.14
LINC01006Q8NI28 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
LINC01006Q8NI28 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms