Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 SOX15-203ENST00000570788 1093 ntBASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 KRT8P3-201ENST00000519669 1449 ntBASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RFWD2Q8NHY2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RFWD2Q8NHY2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RFWD2Q8NHY2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms