Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 AP000523.1-201ENST00000398242 1049 ntBASIC16.62■□□□□ 0.25
ATG4DQ86TL0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 LIN28AP1-201ENST00000429574 405 ntBASIC16.62■□□□□ 0.25
ATG4DQ86TL0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 ATP5G1P1-201ENST00000448724 379 ntBASIC16.62■□□□□ 0.25
ATG4DQ86TL0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 LINC01126-201ENST00000623515 1646 ntBASIC16.62■□□□□ 0.25
ATG4DQ86TL0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 AC018470.1-201ENST00000624790 3129 ntBASIC16.62■□□□□ 0.25
ATG4DQ86TL0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ATG4DQ86TL0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 DUX4L26-201ENST00000489078 1255 ntBASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 AL138966.2-201ENST00000621997 464 ntBASIC16.61■□□□□ 0.25
ATG4DQ86TL0 AC141257.4-201ENST00000634557 245 ntBASIC16.61■□□□□ 0.25
ATG4DQ86TL0 AC136944.6-201ENST00000634818 245 ntBASIC16.61■□□□□ 0.25
ATG4DQ86TL0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 AC138028.4-201ENST00000564984 1845 ntBASIC16.61■□□□□ 0.25
ATG4DQ86TL0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 AL024508.2-201ENST00000607749 1894 ntBASIC16.61■□□□□ 0.25
ATG4DQ86TL0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ATG4DQ86TL0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 ARMC10P1-201ENST00000313754 855 ntBASIC16.6■□□□□ 0.25
ATG4DQ86TL0 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 MIR3917-201ENST00000580971 93 ntBASIC16.6■□□□□ 0.25
ATG4DQ86TL0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.6■□□□□ 0.25
ATG4DQ86TL0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATG4DQ86TL0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.59■□□□□ 0.25
ATG4DQ86TL0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.59■□□□□ 0.25
ATG4DQ86TL0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms