Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
RAI1Q7Z5J4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 MIR574-201ENST00000385209 96 ntBASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 AL138831.2-201ENST00000606564 490 ntBASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 AC148477.8-201ENST00000624298 468 ntBASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RAI1Q7Z5J4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 MIR149-201ENST00000384879 89 ntBASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 PMS2P1-201ENST00000431037 1228 ntBASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 IGHV3-41-201ENST00000613121 348 ntBASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 AC145285.3-201ENST00000564603 959 ntBASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 AL031598.1-201ENST00000561511 1773 ntBASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 AC099343.3-201ENST00000605834 2503 ntBASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RAI1Q7Z5J4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 LINC01711-201ENST00000598340 967 ntBASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 AL163051.1-201ENST00000569214 1512 ntBASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.55■□□□□ 0.08
RAI1Q7Z5J4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms