Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
LCA10Q71F78 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LCA10Q71F78 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC9.9□□□□□ -0.83
LCA10Q71F78 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LCA10Q71F78 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LCA10Q71F78 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
LCA10Q71F78 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
LCA10Q71F78 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 MADD-208ENST00000405573 1823 ntTSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC9.89□□□□□ -0.83
LCA10Q71F78 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 SAPCD2P1-201ENST00000395413 1184 ntBASIC9.89□□□□□ -0.83
LCA10Q71F78 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC9.89□□□□□ -0.83
LCA10Q71F78 AC097381.1-201ENST00000429019 1296 ntBASIC9.89□□□□□ -0.83
LCA10Q71F78 AC123595.1-201ENST00000440769 1046 ntBASIC9.89□□□□□ -0.83
LCA10Q71F78 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 CD44-222ENST00000526025 1052 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC9.89□□□□□ -0.83
LCA10Q71F78 SLC7A5P1-201ENST00000568957 537 ntBASIC9.89□□□□□ -0.83
LCA10Q71F78 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC9.89□□□□□ -0.83
LCA10Q71F78 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 POLL-206ENST00000370172 2308 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 MOK-225ENST00000522867 1883 ntTSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
LCA10Q71F78 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC9.89□□□□□ -0.83
LCA10Q71F78 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LCA10Q71F78 DKFZP434A062-201ENST00000573103 5021 ntBASIC9.89□□□□□ -0.83
LCA10Q71F78 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LCA10Q71F78 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LCA10Q71F78 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LCA10Q71F78 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC9.88□□□□□ -0.83
LCA10Q71F78 AC019069.1-201ENST00000610008 1333 ntBASIC9.88□□□□□ -0.83
LCA10Q71F78 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC9.88□□□□□ -0.83
LCA10Q71F78 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.88□□□□□ -0.83
LCA10Q71F78 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC9.88□□□□□ -0.83
LCA10Q71F78 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.88□□□□□ -0.83
LCA10Q71F78 OVCH1-AS1-204ENST00000641955 5529 ntBASIC9.88□□□□□ -0.83
LCA10Q71F78 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC9.88□□□□□ -0.83
LCA10Q71F78 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LCA10Q71F78 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms