Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 SPDYE15P-201ENST00000424157 909 ntBASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 AL671277.2-201ENST00000458060 996 ntBASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.09■□□□□ 0.65
TTC39BQ5VTQ0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TTC39BQ5VTQ0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 KRT18P38-201ENST00000449496 1282 ntBASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TTC39BQ5VTQ0 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AC005332.8-201ENST00000622750 2735 ntBASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AC112907.2-201ENST00000448639 330 ntBASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AL121956.5-201ENST00000625261 221 ntBASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 AC112777.1-201ENST00000540175 1423 ntBASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.07■□□□□ 0.64
TTC39BQ5VTQ0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TTC39BQ5VTQ0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms