Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 TPSP2-201ENST00000561760 610 ntBASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PRAMEF17Q5VTA0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 IGHGP-201ENST00000390555 1178 ntBASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 LINC00265-3P-201ENST00000447588 903 ntBASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PRAMEF17Q5VTA0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 AP000867.3-201ENST00000524675 377 ntBASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 PRELID1P1-202ENST00000567272 903 ntBASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 GPR32P1-201ENST00000601788 811 ntBASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PRAMEF17Q5VTA0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 178.7 ms