Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.81■□□□□ 0.6
ALFQ53S48 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ALFQ53S48 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.81■□□□□ 0.6
ALFQ53S48 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.81■□□□□ 0.6
ALFQ53S48 IER3-202ENST00000376377 1350 ntBASIC18.81■□□□□ 0.6
ALFQ53S48 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ALFQ53S48 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.8■□□□□ 0.6
ALFQ53S48 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.8■□□□□ 0.6
ALFQ53S48 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 ESPNP-201ENST00000270691 2015 ntBASIC18.8■□□□□ 0.6
ALFQ53S48 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.8■□□□□ 0.6
ALFQ53S48 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.8■□□□□ 0.6
ALFQ53S48 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.8■□□□□ 0.6
ALFQ53S48 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.8■□□□□ 0.6
ALFQ53S48 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ALFQ53S48 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.8■□□□□ 0.6
ALFQ53S48 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ALFQ53S48 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ALFQ53S48 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.79■□□□□ 0.6
ALFQ53S48 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.79■□□□□ 0.6
ALFQ53S48 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.79■□□□□ 0.6
ALFQ53S48 AP000550.4-202ENST00000639755 178 ntBASIC18.79■□□□□ 0.6
ALFQ53S48 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ALFQ53S48 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ALFQ53S48 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.78■□□□□ 0.6
ALFQ53S48 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ALFQ53S48 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.78■□□□□ 0.6
ALFQ53S48 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.78■□□□□ 0.6
ALFQ53S48 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.78■□□□□ 0.6
ALFQ53S48 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 KRT18P48-201ENST00000434763 852 ntBASIC18.78■□□□□ 0.6
ALFQ53S48 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 AC090164.3-201ENST00000610780 2143 ntBASIC18.78■□□□□ 0.6
ALFQ53S48 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.78■□□□□ 0.6
ALFQ53S48 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ALFQ53S48 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.78■□□□□ 0.6
ALFQ53S48 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ALFQ53S48 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.77■□□□□ 0.6
ALFQ53S48 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms