Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 KRT8P50-201ENST00000562022 1438 ntBASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 FAM201B-201ENST00000458407 597 ntBASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 AL096828.2-201ENST00000567259 1965 ntBASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ATP6AP1LQ52LC2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 CA15P1-201ENST00000481698 905 ntBASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 AC116562.2-201ENST00000507042 360 ntBASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.72■□□□□ 0.43
ATP6AP1LQ52LC2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 AC097488.1-201ENST00000507834 756 ntBASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 NUDT16P1-203ENST00000513809 620 ntBASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ATP6AP1LQ52LC2 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6AP1LQ52LC2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6AP1LQ52LC2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.71■□□□□ 0.42
ATP6AP1LQ52LC2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
ATP6AP1LQ52LC2 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms