Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC015922.1-201ENST00000421102 1152 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 LAGE3P1-201ENST00000425356 484 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC108751.1-201ENST00000490852 363 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC004449.1-201ENST00000564240 433 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC011467.2-201ENST00000598425 242 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AL513190.1-201ENST00000621254 727 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC005593.1-201ENST00000624894 515 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AC092865.6-201ENST00000642101 219 ntBASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO4Q2I0M5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 MKNK2P1-201ENST00000437526 628 ntBASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.68■□□□□ 0.42
RSPO4Q2I0M5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 AC069262.1-201ENST00000539058 672 ntBASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 AFG3L1P-217ENST00000557444 2447 ntBASIC17.67■□□□□ 0.42
RSPO4Q2I0M5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.66■□□□□ 0.42
RSPO4Q2I0M5 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms