Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDC42P60953 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC42P60953 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.77■□□□□ 0.28
CDC42P60953 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.77■□□□□ 0.28
CDC42P60953 AC006970.2-201ENST00000450065 779 ntBASIC16.77■□□□□ 0.28
CDC42P60953 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.77■□□□□ 0.28
CDC42P60953 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.77■□□□□ 0.28
CDC42P60953 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDC42P60953 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.77■□□□□ 0.28
CDC42P60953 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CDC42P60953 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDC42P60953 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.77■□□□□ 0.28
CDC42P60953 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.77■□□□□ 0.28
CDC42P60953 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42P60953 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42P60953 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.77■□□□□ 0.27
CDC42P60953 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42P60953 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CDC42P60953 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.77■□□□□ 0.27
CDC42P60953 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDC42P60953 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.77■□□□□ 0.27
CDC42P60953 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42P60953 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDC42P60953 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CDC42P60953 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC42P60953 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDC42P60953 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDC42P60953 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.76■□□□□ 0.27
CDC42P60953 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC42P60953 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC42P60953 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.76■□□□□ 0.27
CDC42P60953 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.76■□□□□ 0.27
CDC42P60953 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDC42P60953 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.76■□□□□ 0.27
CDC42P60953 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC42P60953 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDC42P60953 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.75■□□□□ 0.27
CDC42P60953 POM121L13P-201ENST00000422362 380 ntBASIC16.75■□□□□ 0.27
CDC42P60953 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDC42P60953 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.75■□□□□ 0.27
CDC42P60953 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
CDC42P60953 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.75■□□□□ 0.27
CDC42P60953 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDC42P60953 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.75■□□□□ 0.27
CDC42P60953 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC42P60953 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC42P60953 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC42P60953 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms