Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNX16P57768 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNX16P57768 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX16P57768 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
SNX16P57768 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX16P57768 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
SNX16P57768 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 PVRIG2P-201ENST00000435460 978 ntBASIC19.34■□□□□ 0.69
SNX16P57768 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SNX16P57768 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SNX16P57768 AC011558.1-201ENST00000623459 338 ntBASIC19.34■□□□□ 0.69
SNX16P57768 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.34■□□□□ 0.69
SNX16P57768 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SNX16P57768 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNX16P57768 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.34■□□□□ 0.69
SNX16P57768 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNX16P57768 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
SNX16P57768 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 AC009113.1-201ENST00000570267 2443 ntBASIC19.33■□□□□ 0.69
SNX16P57768 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX16P57768 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.33■□□□□ 0.69
SNX16P57768 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX16P57768 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SNX16P57768 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SNX16P57768 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.33■□□□□ 0.69
SNX16P57768 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNX16P57768 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 STARP1-201ENST00000397973 869 ntBASIC19.33■□□□□ 0.68
SNX16P57768 AK4P3-201ENST00000418260 669 ntBASIC19.33■□□□□ 0.68
SNX16P57768 TSPY5P-201ENST00000426936 936 ntBASIC19.33■□□□□ 0.68
SNX16P57768 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.33■□□□□ 0.68
SNX16P57768 KRT18P57-201ENST00000443599 1254 ntBASIC19.33■□□□□ 0.68
SNX16P57768 LINC01238-205ENST00000567549 1107 ntBASIC19.33■□□□□ 0.68
SNX16P57768 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.33■□□□□ 0.68
SNX16P57768 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
SNX16P57768 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SNX16P57768 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SNX16P57768 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.33■□□□□ 0.68
SNX16P57768 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
SNX16P57768 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SNX16P57768 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNX16P57768 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.33■□□□□ 0.68
SNX16P57768 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX16P57768 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.32■□□□□ 0.68
SNX16P57768 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX16P57768 FAM8A6P-201ENST00000407496 1135 ntBASIC19.32■□□□□ 0.68
SNX16P57768 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 RASA4DP-201ENST00000460726 1199 ntBASIC19.32■□□□□ 0.68
SNX16P57768 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 AL441883.1-201ENST00000566170 1045 ntBASIC19.32■□□□□ 0.68
SNX16P57768 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNX16P57768 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SNX16P57768 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.32■□□□□ 0.68
SNX16P57768 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
SNX16P57768 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNX16P57768 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX16P57768 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX16P57768 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.31■□□□□ 0.68
SNX16P57768 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SNX16P57768 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX16P57768 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX16P57768 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SNX16P57768 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms