Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 ID1-201ENST00000376105 1233 ntBASIC17.54■□□□□ 0.4
POLR2JP52435 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR2JP52435 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.54■□□□□ 0.4
POLR2JP52435 RARRES2P10-201ENST00000564312 460 ntBASIC17.54■□□□□ 0.4
POLR2JP52435 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2JP52435 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2JP52435 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.54■□□□□ 0.4
POLR2JP52435 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
POLR2JP52435 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2JP52435 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2JP52435 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.54■□□□□ 0.4
POLR2JP52435 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
POLR2JP52435 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
POLR2JP52435 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
POLR2JP52435 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
POLR2JP52435 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.53■□□□□ 0.4
POLR2JP52435 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.53■□□□□ 0.4
POLR2JP52435 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
POLR2JP52435 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.53■□□□□ 0.4
POLR2JP52435 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
POLR2JP52435 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR2JP52435 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR2JP52435 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 AC099343.3-201ENST00000605834 2503 ntBASIC17.53■□□□□ 0.4
POLR2JP52435 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
POLR2JP52435 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.53■□□□□ 0.4
POLR2JP52435 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
POLR2JP52435 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
POLR2JP52435 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR2JP52435 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.52■□□□□ 0.4
POLR2JP52435 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 MESTP1-201ENST00000404287 994 ntBASIC17.52■□□□□ 0.4
POLR2JP52435 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR2JP52435 AC128676.1-201ENST00000454392 318 ntBASIC17.52■□□□□ 0.4
POLR2JP52435 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR2JP52435 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.52■□□□□ 0.4
POLR2JP52435 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.52■□□□□ 0.4
POLR2JP52435 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
POLR2JP52435 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
POLR2JP52435 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR2JP52435 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
POLR2JP52435 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR2JP52435 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
POLR2JP52435 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
POLR2JP52435 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.51■□□□□ 0.39
POLR2JP52435 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
POLR2JP52435 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
POLR2JP52435 AC012317.2-201ENST00000623305 2251 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms