Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.01□□□□□ -0.01
NKX2-1P43699 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 AC084018.2-201ENST00000613093 2607 ntBASIC15.01□□□□□ -0.01
NKX2-1P43699 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-1P43699 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NKX2-1P43699 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NKX2-1P43699 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
NKX2-1P43699 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NKX2-1P43699 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 AC124067.4-201ENST00000519691 2379 ntBASIC15□□□□□ -0.01
NKX2-1P43699 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
NKX2-1P43699 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-1P43699 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
NKX2-1P43699 MIPEPP3-201ENST00000412105 444 ntBASIC15□□□□□ -0.01
NKX2-1P43699 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15□□□□□ -0.01
NKX2-1P43699 CROCCP5-201ENST00000436658 830 ntBASIC15□□□□□ -0.01
NKX2-1P43699 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-1P43699 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 OR2A1-AS1-207ENST00000486094 819 ntBASIC15□□□□□ -0.01
NKX2-1P43699 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15□□□□□ -0.01
NKX2-1P43699 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-1P43699 C1QL1P1-201ENST00000568105 661 ntBASIC15□□□□□ -0.01
NKX2-1P43699 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
NKX2-1P43699 AL121832.2-201ENST00000610979 668 ntBASIC15□□□□□ -0.01
NKX2-1P43699 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15□□□□□ -0.01
NKX2-1P43699 AL050303.2-201ENST00000619798 666 ntBASIC15□□□□□ -0.01
NKX2-1P43699 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 AD000864.1-201ENST00000624076 2295 ntBASIC15□□□□□ -0.01
NKX2-1P43699 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 AL096828.2-201ENST00000567259 1965 ntBASIC15□□□□□ -0.01
NKX2-1P43699 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15□□□□□ -0.01
NKX2-1P43699 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 HLA-DQB1-201ENST00000374943 1656 ntBASIC15□□□□□ -0.01
NKX2-1P43699 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NKX2-1P43699 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NKX2-1P43699 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
NKX2-1P43699 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
NKX2-1P43699 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-1P43699 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.99□□□□□ -0.01
NKX2-1P43699 PNMA6B-201ENST00000538162 1200 ntBASIC14.99□□□□□ -0.01
NKX2-1P43699 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.99□□□□□ -0.01
NKX2-1P43699 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
NKX2-1P43699 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
NKX2-1P43699 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
NKX2-1P43699 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
NKX2-1P43699 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.98□□□□□ -0.01
NKX2-1P43699 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
NKX2-1P43699 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms