Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.8■□□□□ 0.28
SHC1P29353 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 AC020916.1-201ENST00000587762 1774 ntBASIC16.8■□□□□ 0.28
SHC1P29353 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 ANO7L1-203ENST00000602586 1720 ntBASIC16.8■□□□□ 0.28
SHC1P29353 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.8■□□□□ 0.28
SHC1P29353 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHC1P29353 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.8■□□□□ 0.28
SHC1P29353 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
SHC1P29353 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.8■□□□□ 0.28
SHC1P29353 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.8■□□□□ 0.28
SHC1P29353 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 AC006011.2-201ENST00000621313 1158 ntBASIC16.8■□□□□ 0.28
SHC1P29353 AL023973.1-201ENST00000624619 620 ntBASIC16.8■□□□□ 0.28
SHC1P29353 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SHC1P29353 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.8■□□□□ 0.28
SHC1P29353 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SHC1P29353 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SHC1P29353 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 ABALON-201ENST00000629058 1903 ntBASIC16.79■□□□□ 0.28
SHC1P29353 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.79■□□□□ 0.28
SHC1P29353 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.79■□□□□ 0.28
SHC1P29353 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 AC092865.7-201ENST00000641832 219 ntBASIC16.79■□□□□ 0.28
SHC1P29353 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.79■□□□□ 0.28
SHC1P29353 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.79■□□□□ 0.28
SHC1P29353 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SHC1P29353 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC1P29353 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.78■□□□□ 0.28
SHC1P29353 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SHC1P29353 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.78■□□□□ 0.28
SHC1P29353 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
SHC1P29353 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.78■□□□□ 0.28
SHC1P29353 TMPOP1-202ENST00000424642 1267 ntBASIC16.78■□□□□ 0.28
SHC1P29353 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.78■□□□□ 0.28
SHC1P29353 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.78■□□□□ 0.28
SHC1P29353 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.78■□□□□ 0.28
SHC1P29353 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
SHC1P29353 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SHC1P29353 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SHC1P29353 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SHC1P29353 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SHC1P29353 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SHC1P29353 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms