Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB4P28070 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.66■□□□□ 0.58
PSMB4P28070 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.66■□□□□ 0.58
PSMB4P28070 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.66■□□□□ 0.58
PSMB4P28070 SEC1P-202ENST00000473944 940 ntBASIC18.66■□□□□ 0.58
PSMB4P28070 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.66■□□□□ 0.58
PSMB4P28070 AC010240.3-201ENST00000607688 395 ntBASIC18.66■□□□□ 0.58
PSMB4P28070 AC024243.1-201ENST00000609234 778 ntBASIC18.66■□□□□ 0.58
PSMB4P28070 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PSMB4P28070 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB4P28070 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB4P28070 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PSMB4P28070 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.65■□□□□ 0.58
PSMB4P28070 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.65■□□□□ 0.58
PSMB4P28070 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PSMB4P28070 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.65■□□□□ 0.58
PSMB4P28070 AC138028.4-201ENST00000564984 1845 ntBASIC18.65■□□□□ 0.58
PSMB4P28070 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PSMB4P28070 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PSMB4P28070 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PSMB4P28070 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.64■□□□□ 0.58
PSMB4P28070 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB4P28070 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB4P28070 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB4P28070 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB4P28070 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PSMB4P28070 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PSMB4P28070 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.64■□□□□ 0.58
PSMB4P28070 AC008764.6-201ENST00000595909 2069 ntBASIC18.64■□□□□ 0.57
PSMB4P28070 LINC01126-201ENST00000623515 1646 ntBASIC18.64■□□□□ 0.57
PSMB4P28070 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PSMB4P28070 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.64■□□□□ 0.57
PSMB4P28070 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.64■□□□□ 0.57
PSMB4P28070 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
PSMB4P28070 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.64■□□□□ 0.57
PSMB4P28070 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.64■□□□□ 0.57
PSMB4P28070 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PSMB4P28070 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.64■□□□□ 0.57
PSMB4P28070 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PSMB4P28070 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PSMB4P28070 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
PSMB4P28070 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.63■□□□□ 0.57
PSMB4P28070 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMB4P28070 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.63■□□□□ 0.57
PSMB4P28070 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 AC009065.1-201ENST00000564055 1225 ntBASIC18.63■□□□□ 0.57
PSMB4P28070 AL512604.3-201ENST00000569583 964 ntBASIC18.63■□□□□ 0.57
PSMB4P28070 MIR3180-4-201ENST00000582223 153 ntBASIC18.63■□□□□ 0.57
PSMB4P28070 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PSMB4P28070 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms