Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL3P0C7X3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.69■□□□□ 0.42
CCNYL3P0C7X3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL3P0C7X3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL3P0C7X3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CROCCP3-202ENST00000420820 1947 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 AL138781.2-201ENST00000617896 1843 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 AC011498.5-201ENST00000592027 486 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CLEC4GP1-201ENST00000596555 870 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 AL121672.3-201ENST00000608644 468 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 AL589935.2-201ENST00000616471 1231 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 AC007613.1-201ENST00000572811 2597 ntBASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL3P0C7X3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 KRT8P7-201ENST00000533003 1432 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 TPM4P1-201ENST00000436100 807 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 DUSP5P1-201ENST00000441325 1139 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 SEC1P-202ENST00000473944 940 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 AL691432.3-201ENST00000621860 400 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 IRX1P1-201ENST00000438849 1838 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 AL109659.2-201ENST00000606809 1674 ntBASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL3P0C7X3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 FP475955.4-201ENST00000623131 1990 ntBASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 SPDYE13P-201ENST00000445314 798 ntBASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 AC092329.2-201ENST00000598402 547 ntBASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 RCC2P3-201ENST00000418112 1537 ntBASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNYL3P0C7X3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms