Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.87■□□□□ 0.29
THBS1P07996 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
THBS1P07996 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
THBS1P07996 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 CYP2D8P-201ENST00000433633 1490 ntBASIC16.86■□□□□ 0.29
THBS1P07996 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
THBS1P07996 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 BCL2-203ENST00000589955 5011 ntBASIC16.86■□□□□ 0.29
THBS1P07996 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
THBS1P07996 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
THBS1P07996 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.86■□□□□ 0.29
THBS1P07996 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
THBS1P07996 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 AC010240.3-201ENST00000607688 395 ntBASIC16.86■□□□□ 0.29
THBS1P07996 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.86■□□□□ 0.29
THBS1P07996 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
THBS1P07996 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
THBS1P07996 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
THBS1P07996 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
THBS1P07996 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 INGX-201ENST00000359239 846 ntBASIC16.85■□□□□ 0.29
THBS1P07996 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
THBS1P07996 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.85■□□□□ 0.29
THBS1P07996 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.85■□□□□ 0.29
THBS1P07996 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.85■□□□□ 0.29
THBS1P07996 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.85■□□□□ 0.29
THBS1P07996 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.85■□□□□ 0.29
THBS1P07996 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
THBS1P07996 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 AC093010.1-201ENST00000473625 1624 ntBASIC16.85■□□□□ 0.29
THBS1P07996 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
THBS1P07996 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
THBS1P07996 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
THBS1P07996 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
THBS1P07996 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
THBS1P07996 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.84■□□□□ 0.29
THBS1P07996 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms