Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ERCC1P07992 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
ERCC1P07992 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.27■□□□□ 0.19
ERCC1P07992 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ERCC1P07992 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
ERCC1P07992 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.26■□□□□ 0.19
ERCC1P07992 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.26■□□□□ 0.19
ERCC1P07992 AC008040.2-201ENST00000461049 708 ntBASIC16.26■□□□□ 0.19
ERCC1P07992 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC1P07992 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC1P07992 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC1P07992 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
ERCC1P07992 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC1P07992 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.26■□□□□ 0.19
ERCC1P07992 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
ERCC1P07992 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 NOC2LP2-201ENST00000407594 1944 ntBASIC16.25■□□□□ 0.19
ERCC1P07992 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERCC1P07992 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.25■□□□□ 0.19
ERCC1P07992 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC1P07992 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ERCC1P07992 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC1P07992 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
ERCC1P07992 BX664615.1-201ENST00000443558 458 ntBASIC16.25■□□□□ 0.19
ERCC1P07992 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC1P07992 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ERCC1P07992 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC1P07992 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC1P07992 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
ERCC1P07992 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC1P07992 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
ERCC1P07992 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC1P07992 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC1P07992 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC1P07992 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
ERCC1P07992 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
ERCC1P07992 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC1P07992 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
ERCC1P07992 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
ERCC1P07992 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC1P07992 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms