Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ERBB2P04626 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ERBB2P04626 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 AL096828.2-201ENST00000567259 1965 ntBASIC19.25■□□□□ 0.67
ERBB2P04626 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ERBB2P04626 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.25■□□□□ 0.67
ERBB2P04626 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 AC092597.1-201ENST00000487352 616 ntBASIC19.25■□□□□ 0.67
ERBB2P04626 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ERBB2P04626 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ERBB2P04626 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.25■□□□□ 0.67
ERBB2P04626 REXO1L9P-201ENST00000604264 2108 ntBASIC19.25■□□□□ 0.67
ERBB2P04626 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.25■□□□□ 0.67
ERBB2P04626 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERBB2P04626 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ERBB2P04626 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ERBB2P04626 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.24■□□□□ 0.67
ERBB2P04626 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ERBB2P04626 DUX4L26-201ENST00000489078 1255 ntBASIC19.24■□□□□ 0.67
ERBB2P04626 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
ERBB2P04626 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.24■□□□□ 0.67
ERBB2P04626 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.24■□□□□ 0.67
ERBB2P04626 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERBB2P04626 AC020763.4-201ENST00000623414 4170 ntBASIC19.24■□□□□ 0.67
ERBB2P04626 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
ERBB2P04626 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.24■□□□□ 0.67
ERBB2P04626 AL391807.1-203ENST00000604392 2365 ntBASIC19.24■□□□□ 0.67
ERBB2P04626 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 AC063952.2-201ENST00000498792 1227 ntBASIC19.23■□□□□ 0.67
ERBB2P04626 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.23■□□□□ 0.67
ERBB2P04626 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ERBB2P04626 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ERBB2P04626 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ERBB2P04626 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.22■□□□□ 0.67
ERBB2P04626 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 HOMER2P1-201ENST00000455653 964 ntBASIC19.22■□□□□ 0.67
ERBB2P04626 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.22■□□□□ 0.67
ERBB2P04626 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.22■□□□□ 0.67
ERBB2P04626 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ERBB2P04626 AL136038.4-201ENST00000603606 1261 ntBASIC19.22■□□□□ 0.67
ERBB2P04626 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.22■□□□□ 0.67
ERBB2P04626 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.22■□□□□ 0.67
ERBB2P04626 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms