Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL845331.1-201ENST00000424978 1190 ntBASIC17.87■□□□□ 0.45
TNFP01375 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
TNFP01375 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.87■□□□□ 0.45
TNFP01375 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TNFP01375 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFP01375 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.87■□□□□ 0.45
TNFP01375 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TNFP01375 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TNFP01375 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 IGHV3-47-201ENST00000425060 335 ntBASIC17.86■□□□□ 0.45
TNFP01375 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TNFP01375 KRT18P31-201ENST00000506277 1292 ntBASIC17.86■□□□□ 0.45
TNFP01375 UNC93B7-201ENST00000509439 705 ntBASIC17.86■□□□□ 0.45
TNFP01375 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 AC138894.3-201ENST00000603787 634 ntBASIC17.86■□□□□ 0.45
TNFP01375 IFNL4P1-201ENST00000607083 540 ntBASIC17.86■□□□□ 0.45
TNFP01375 AL732292.2-201ENST00000609649 430 ntBASIC17.86■□□□□ 0.45
TNFP01375 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.86■□□□□ 0.45
TNFP01375 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TNFP01375 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.86■□□□□ 0.45
TNFP01375 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TNFP01375 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TNFP01375 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
TNFP01375 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TNFP01375 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFP01375 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFP01375 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.85■□□□□ 0.45
TNFP01375 MINOS1P3-201ENST00000457048 203 ntBASIC17.85■□□□□ 0.45
TNFP01375 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TNFP01375 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.85■□□□□ 0.45
TNFP01375 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.85■□□□□ 0.45
TNFP01375 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.85■□□□□ 0.45
TNFP01375 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.85■□□□□ 0.45
TNFP01375 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TNFP01375 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFP01375 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 NSUN5P1-202ENST00000421140 1535 ntBASIC17.84■□□□□ 0.45
TNFP01375 NSUN5P2-203ENST00000457352 1529 ntBASIC17.84■□□□□ 0.45
TNFP01375 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFP01375 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TNFP01375 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFP01375 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFP01375 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.84■□□□□ 0.45
TNFP01375 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.84■□□□□ 0.45
TNFP01375 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.84■□□□□ 0.45
TNFP01375 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TNFP01375 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms