Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM13O60858 KRT18P6-201ENST00000555540 1265 ntBASIC18.06■□□□□ 0.48
TRIM13O60858 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM13O60858 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TRIM13O60858 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM13O60858 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.06■□□□□ 0.48
TRIM13O60858 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.06■□□□□ 0.48
TRIM13O60858 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM13O60858 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM13O60858 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM13O60858 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM13O60858 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRIM13O60858 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM13O60858 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
TRIM13O60858 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
TRIM13O60858 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 FSCN1P1-201ENST00000568912 1481 ntBASIC18.05■□□□□ 0.48
TRIM13O60858 GPAT2P1-201ENST00000444924 1672 ntBASIC18.05■□□□□ 0.48
TRIM13O60858 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.05■□□□□ 0.48
TRIM13O60858 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.05■□□□□ 0.48
TRIM13O60858 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
TRIM13O60858 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.05■□□□□ 0.48
TRIM13O60858 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRIM13O60858 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRIM13O60858 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRIM13O60858 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRIM13O60858 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
TRIM13O60858 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM13O60858 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.04■□□□□ 0.48
TRIM13O60858 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.04■□□□□ 0.48
TRIM13O60858 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.04■□□□□ 0.48
TRIM13O60858 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
TRIM13O60858 AC006058.3-201ENST00000606217 1069 ntBASIC18.04■□□□□ 0.48
TRIM13O60858 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRIM13O60858 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM13O60858 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM13O60858 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM13O60858 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM13O60858 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.03■□□□□ 0.48
TRIM13O60858 RARRES2P10-201ENST00000564312 460 ntBASIC18.03■□□□□ 0.48
TRIM13O60858 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM13O60858 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM13O60858 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.03■□□□□ 0.48
TRIM13O60858 SIRPAP1-201ENST00000448467 1770 ntBASIC18.03■□□□□ 0.48
TRIM13O60858 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRIM13O60858 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.03■□□□□ 0.48
TRIM13O60858 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRIM13O60858 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRIM13O60858 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms