Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.11■□□□□ 0.17
CCL21O00585 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CCL21O00585 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL21O00585 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.11■□□□□ 0.17
CCL21O00585 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CCL21O00585 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CCL21O00585 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CCL21O00585 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CCL21O00585 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
CCL21O00585 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL21O00585 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL21O00585 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.1■□□□□ 0.17
CCL21O00585 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL21O00585 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL21O00585 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL21O00585 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.1■□□□□ 0.17
CCL21O00585 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CCL21O00585 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.1■□□□□ 0.17
CCL21O00585 AC104109.2-201ENST00000602919 1418 ntBASIC16.1■□□□□ 0.17
CCL21O00585 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CCL21O00585 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CCL21O00585 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CCL21O00585 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL21O00585 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL21O00585 AC005104.2-201ENST00000427818 678 ntBASIC16.09■□□□□ 0.17
CCL21O00585 MTCL1P1-201ENST00000446207 792 ntBASIC16.09■□□□□ 0.17
CCL21O00585 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.09■□□□□ 0.17
CCL21O00585 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 AC027601.4-201ENST00000611259 610 ntBASIC16.09■□□□□ 0.17
CCL21O00585 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 INTS4P1-201ENST00000438455 1935 ntBASIC16.09■□□□□ 0.17
CCL21O00585 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CCL21O00585 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CCL21O00585 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CCL21O00585 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.09■□□□□ 0.17
CCL21O00585 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL21O00585 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL21O00585 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL21O00585 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL21O00585 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL21O00585 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.08■□□□□ 0.17
CCL21O00585 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL21O00585 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CCL21O00585 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.08■□□□□ 0.17
CCL21O00585 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.08■□□□□ 0.17
CCL21O00585 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL21O00585 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL21O00585 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCL21O00585 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.08■□□□□ 0.16
CCL21O00585 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms