Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 INGX-201ENST00000359239 846 ntBASIC17.38■□□□□ 0.37
UPK1AO00322 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
UPK1AO00322 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.38■□□□□ 0.37
UPK1AO00322 AC010947.1-201ENST00000623454 693 ntBASIC17.38■□□□□ 0.37
UPK1AO00322 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.38■□□□□ 0.37
UPK1AO00322 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
UPK1AO00322 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPK1AO00322 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
UPK1AO00322 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.38■□□□□ 0.37
UPK1AO00322 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPK1AO00322 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPK1AO00322 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UPK1AO00322 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
UPK1AO00322 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.37■□□□□ 0.37
UPK1AO00322 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UPK1AO00322 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UPK1AO00322 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 AC036111.1-201ENST00000533973 1582 ntBASIC17.37■□□□□ 0.37
UPK1AO00322 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 AC034236.2-201ENST00000606662 1610 ntBASIC17.37■□□□□ 0.37
UPK1AO00322 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UPK1AO00322 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UPK1AO00322 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.37■□□□□ 0.37
UPK1AO00322 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.37■□□□□ 0.37
UPK1AO00322 NAPSB-206ENST00000562112 1266 ntBASIC17.37■□□□□ 0.37
UPK1AO00322 AC010653.2-201ENST00000623505 997 ntBASIC17.37■□□□□ 0.37
UPK1AO00322 PCDHA12-202ENST00000613593 2588 ntBASIC17.37■□□□□ 0.37
UPK1AO00322 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
UPK1AO00322 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.37■□□□□ 0.37
UPK1AO00322 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.37■□□□□ 0.37
UPK1AO00322 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UPK1AO00322 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
UPK1AO00322 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.37■□□□□ 0.37
UPK1AO00322 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
UPK1AO00322 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 MYLKP1-201ENST00000509077 1580 ntBASIC17.36■□□□□ 0.37
UPK1AO00322 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.36■□□□□ 0.37
UPK1AO00322 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.36■□□□□ 0.37
UPK1AO00322 CR769767.2-201ENST00000622735 460 ntBASIC17.36■□□□□ 0.37
UPK1AO00322 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
UPK1AO00322 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UPK1AO00322 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UPK1AO00322 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
UPK1AO00322 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 AC012317.2-201ENST00000623305 2251 ntBASIC17.35■□□□□ 0.37
UPK1AO00322 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.35■□□□□ 0.37
UPK1AO00322 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.35■□□□□ 0.37
UPK1AO00322 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
UPK1AO00322 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.35■□□□□ 0.37
UPK1AO00322 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.35■□□□□ 0.37
UPK1AO00322 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UPK1AO00322 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UPK1AO00322 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.35■□□□□ 0.37
UPK1AO00322 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms