Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.58■□□□□ 0.89
DDX39AO00148 AC012313.10-201ENST00000623509 926 ntBASIC20.58■□□□□ 0.89
DDX39AO00148 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.58■□□□□ 0.89
DDX39AO00148 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
DDX39AO00148 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX39AO00148 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.58■□□□□ 0.88
DDX39AO00148 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
DDX39AO00148 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
DDX39AO00148 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.58■□□□□ 0.88
DDX39AO00148 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX39AO00148 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
DDX39AO00148 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 KRT18P1-202ENST00000452408 1331 ntBASIC20.57■□□□□ 0.88
DDX39AO00148 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX39AO00148 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX39AO00148 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX39AO00148 CHCHD2P8-201ENST00000429873 447 ntBASIC20.57■□□□□ 0.88
DDX39AO00148 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.57■□□□□ 0.88
DDX39AO00148 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.57■□□□□ 0.88
DDX39AO00148 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.57■□□□□ 0.88
DDX39AO00148 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 AC004263.2-201ENST00000617183 678 ntBASIC20.57■□□□□ 0.88
DDX39AO00148 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX39AO00148 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
DDX39AO00148 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.57■□□□□ 0.88
DDX39AO00148 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DDX39AO00148 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.57■□□□□ 0.88
DDX39AO00148 LINC01126-201ENST00000623515 1646 ntBASIC20.56■□□□□ 0.88
DDX39AO00148 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DDX39AO00148 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
DDX39AO00148 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 MIR3180-1-201ENST00000580374 94 ntBASIC20.56■□□□□ 0.88
DDX39AO00148 MIR3180-3-201ENST00000584616 94 ntBASIC20.56■□□□□ 0.88
DDX39AO00148 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 AC092329.2-201ENST00000598402 547 ntBASIC20.56■□□□□ 0.88
DDX39AO00148 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.56■□□□□ 0.88
DDX39AO00148 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 BX323043.1-201ENST00000641006 1765 ntBASIC20.56■□□□□ 0.88
DDX39AO00148 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DDX39AO00148 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
DDX39AO00148 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 WIZP1-201ENST00000531444 2299 ntBASIC20.55■□□□□ 0.88
DDX39AO00148 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
DDX39AO00148 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DDX39AO00148 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.55■□□□□ 0.88
DDX39AO00148 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.55■□□□□ 0.88
DDX39AO00148 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DDX39AO00148 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms