Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC055733.4-201ENST00000638462 1354 ntBASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
CHKB-CPT1BH3BT56 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 PTENP1-202ENST00000532280 3996 ntBASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AC139795.1-202ENST00000500444 432 ntBASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 AC016575.1-201ENST00000607026 382 ntBASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 DOC2GP-204ENST00000639052 2548 ntBASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 Z98044.1-201ENST00000632503 1764 ntBASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 BX119927.1-201ENST00000636596 1552 ntBASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
CHKB-CPT1BH3BT56 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 KRT18P24-201ENST00000344739 1156 ntBASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CHKB-CPT1BH3BT56 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms