Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 ANO7L1-203ENST00000602586 1720 ntBASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 AL499627.1-201ENST00000569373 2188 ntBASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC087289.5-201ENST00000586076 3175 ntBASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
IGHV4-28A0A0C4DH34 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 MIR662-201ENST00000384847 95 ntBASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 MIR149-201ENST00000384879 89 ntBASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC011498.5-201ENST00000592027 486 ntBASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC099343.3-201ENST00000605834 2503 ntBASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 KRT18P48-201ENST00000434763 852 ntBASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 WDR6-223ENST00000627177 207 ntTSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
IGHV4-28A0A0C4DH34 AC009102.3-201ENST00000623118 1491 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms