Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 GAS2L1P1-201ENST00000420145 1480 ntBASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 AP006587.1-201ENST00000534129 1502 ntBASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 AL139384.1-201ENST00000612143 3047 ntBASIC12.11□□□□□ -0.47
TRAV13-2A0A0B4J235 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 KATNBL1P6-202ENST00000562413 1466 ntBASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRAV13-2A0A0B4J235 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 GOLGA6L5P-202ENST00000515341 1828 ntBASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
TRAV13-2A0A0B4J235 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms