Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 AL445675.2-201ENST00000620291 557 ntBASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 KRT16P1-201ENST00000399124 1418 ntBASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
TRAV8-3A0A0A6YYJ7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AL160286.2-201ENST00000567150 934 ntBASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AL031985.4-201ENST00000642138 673 ntBASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.01□□□□□ -0.33
TRAV8-3A0A0A6YYJ7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms