Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 AC134043.2-201ENST00000624206 2238 ntBASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV27A0A087WT01 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 AP005242.2-201ENST00000580065 1175 ntBASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 LTB4R2-202ENST00000528054 3092 ntBASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV27A0A087WT01 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 PHGDH-209ENST00000641074 1780 ntBASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV27A0A087WT01 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 SDHAP2-201ENST00000455183 2001 ntBASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV27A0A087WT01 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms