Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KCNE3Q9Y6H6 AC026471.1-201ENST00000564629 3026 ntBASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 AC008764.6-201ENST00000595909 2069 ntBASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 HMGA1P5-201ENST00000412453 271 ntBASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 SEC1P-202ENST00000473944 940 ntBASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KCNE3Q9Y6H6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.04■□□□□ 0.32
KCNE3Q9Y6H6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 AC138028.4-201ENST00000564984 1845 ntBASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 AC010240.3-201ENST00000607688 395 ntBASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
KCNE3Q9Y6H6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
KCNE3Q9Y6H6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms