Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAPPC1Q9Y5R8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PCDHA14-201ENST00000506751 2298 ntBASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 AL355001.2-201ENST00000620617 1191 ntBASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 CYP21A1P-202ENST00000354927 1481 ntBASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAPPC1Q9Y5R8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 AC079140.4-201ENST00000507448 529 ntBASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 AC233992.3-201ENST00000607491 485 ntBASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAPPC1Q9Y5R8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 LINC00554-201ENST00000564841 3011 ntBASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAPPC1Q9Y5R8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms